Bioinformatics Software Engineer developing and maintaining software for genomic data analysis at MSK. Join a collaborative team to improve treatments for pediatric cancers.
Responsibilities
Design, build, and maintain software that enables researchers to analyze, visualize, and interpret genomic data at scale.
Work on infrastructure that directly supports large-scale research and translational efforts, including near–real-time analysis of patient tumor samples.
Contribute across the full software lifecycle—from design and implementation to testing, documentation, and deployment.
Requirements
Bachelor’s or Master’s degree in Computer Science, Bioinformatics, or a related field.
2+ years of relevant professional or research experience.
Strong proficiency in Python.
Experience with workflow systems such as Nextflow and/or Snakemake.
Experience with containerized environments (Docker, Singularity).
Comfort working in Linux/HPC environments and on the command line (bash).
Familiarity with Conda-based dependency management.
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