About the role

  • Bioinformatics Software Engineer developing and maintaining software for genomic data analysis at MSK. Join a collaborative team to improve treatments for pediatric cancers.

Responsibilities

  • Design, build, and maintain software that enables researchers to analyze, visualize, and interpret genomic data at scale.
  • Work on infrastructure that directly supports large-scale research and translational efforts, including near–real-time analysis of patient tumor samples.
  • Contribute across the full software lifecycle—from design and implementation to testing, documentation, and deployment.

Requirements

  • Bachelor’s or Master’s degree in Computer Science, Bioinformatics, or a related field.
  • 2+ years of relevant professional or research experience.
  • Strong proficiency in Python.
  • Experience with workflow systems such as Nextflow and/or Snakemake.
  • Experience with containerized environments (Docker, Singularity).
  • Comfort working in Linux/HPC environments and on the command line (bash).
  • Familiarity with Conda-based dependency management.
  • Basic familiarity with R.

Benefits

  • Health insurance
  • Flexible work arrangements
  • Bonuses

Job title

Bioinformatics Software Engineer III

Job type

Experience level

JuniorMid level

Salary

$121,400 - $200,400 per year

Degree requirement

Bachelor's Degree

Location requirements

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